Basic Information
Locus ID:
Zma_g23665
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Belongs to the universal ribosomal protein uS3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr14 | 1413385 | 1415424 | - | Zma_g23665 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.90 | 32,558.77 Da | 47.28 | 90.88 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02413 | 40S_S3_KH | 82 | 162 | 3.85E-52 | - |
| Pfam | PF00189 | Ribosomal protein S3, C-terminal domain | 173 | 255 | 1.0E-24 | IPR001351 |
| Pfam | PF07650 | KH domain | 87 | 160 | 1.2E-11 | IPR004044 |
| SUPERFAMILY | SSF54821 | Ribosomal protein S3 C-terminal domain | 160 | 258 | 7.06E-28 | IPR036419 |
| SUPERFAMILY | SSF54814 | Prokaryotic type KH domain (KH-domain type II) | 77 | 166 | 1.6E-25 | IPR009019 |
| Gene3D | G3DSA:3.30.300.20 | - | 65 | 158 | 3.6E-48 | IPR015946 |
| Gene3D | G3DSA:3.30.1140.32 | - | 160 | 286 | 3.2E-65 | IPR036419 |
| TIGRFAM | TIGR01008 | uS3_euk_arch: ribosomal protein uS3 | 75 | 277 | 4.5E-71 | IPR005703 |
| ProSiteProfiles | PS50823 | Type-2 KH domain profile. | 88 | 159 | 11.016348 | IPR004044 |
| ProSitePatterns | PS00548 | Ribosomal protein S3 signature. | 214 | 250 | - | IPR018280 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 40 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35530.1 | Ribosomal protein S3 family protein. | 0 |
| RefSeq | XP_004972758.1 | 40S ribosomal protein S3-3 [Setaria italica] | 0 |
| Q9FJA6 | Small ribosomal subunit protein uS3x OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W3L1 | KH type-2 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_09375 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology