HalophFGD

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Basic Information
Locus ID: Zma_g23659
Species & Taxonomic ID: Zoysia macrostachya & 121788
Genome Assembly: GCA_049640385.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Zma_chr14 1389151 1392052 + Zma_g23659
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.82 19,407.71 Da 60.13 81.42 -0.58
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03980 Nnf1 46 139 7.5E-9 IPR007128
Coils Coil Coil 123 143 - -
Gene Ontology
Cellular Component:
GO:0000444 (MIS12/MIND type complex)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G19350.1 embryo defective 3006. 0
RefSeq XP_025820660.1 uncharacterized protein LOC112896750 isoform X1 [Panicum hallii] 0
TrEMBL A0A5J9W693 Uncharacterized protein OS=Eragrostis curvula OX=38414 GN=EJB05_09359 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 1 jg23659
Aizoaceae Mesembryanthemum crystallinum 1 gene_1754
Amaranthaceae Atriplex hortensis 1 Ah003481
Amaranthaceae Beta vulgaris 1 BVRB_8g189510
Amaranthaceae Salicornia bigelovii 3 Sbi_jg4678, Sbi_jg7400, Sbi_jg7401
Amaranthaceae Salicornia europaea 1 Seu_jg12629
Amaranthaceae Suaeda aralocaspica 1 GOSA_00001375
Amaranthaceae Suaeda glauca 2 Sgl51757, Sgl57062
Amaranthaceae Chenopodium album 2 gene:ENSEOMG00000020108, gene:ENSEOMG00000024140
Amaranthaceae Chenopodium quinoa 3 CQ.Regalona.r1.5BG0009900, CQ.Regalona.r1.5BG0009910 ...
CQ.Regalona.r1.5BG0009920
Anacardiaceae Pistacia vera 2 pistato.v30125180, pistato.v30195870
Apiaceae Apium graveolens 1 Ag9G01569
Arecaceae Cocos nucifera 1 COCNU_08G005580
Arecaceae Phoenix dactylifera 2 gene-LOC103696811, gene-LOC120105906
Asparagaceae Asparagus officinalis 1 AsparagusV1_Unassigned.144.V1.1
Asteraceae Flaveria trinervia 1 Ftri13G21529
Brassicaceae Arabidopsis thaliana 1 AT4G19350.1
Brassicaceae Eutrema salsugineum 1 Thhalv10026808m.g.v1.0
Brassicaceae Schrenkiella parvula 1 Sp7g17960.v2.2
Brassicaceae Brassica nigra 1 BniB05g017090.2N
Casuarinaceae Casuarina equisetifolia 1 Ceq01G0047
Casuarinaceae Casuarina glauca 1 Cgl01G0030
Cymodoceaceae Cymodocea nodosa 1 gene.Cymno18g05300
Dunaliellaceae Dunaliella salina 1 Dusal.0503s00003.v1.0
Hydrocharitaceae Thalassia testudinum 1 gene.Thate09g04300
Malvaceae Hibiscus hamabo Siebold & Zucc. 1 nbisL1-mrna-11429
Nitrariaceae Nitraria sibirica 2 evm.TU.LG02.83, evm.TU.LG09.1137
Plantaginaceae Plantago ovata 2 Pov_00000932, Pov_00028571
Plumbaginaceae Limonium bicolor 2 Lb4G23963, Lb4G24305
Poaceae Echinochloa crus-galli 3 AH08.410, BH08.419, CH08.494
Poaceae Eleusine coracana subsp. coracana 1 gene-QOZ80_8AG0618510
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.5HG0507840.1
Poaceae Oryza coarctata 2 Oco15G002740, Oco16G002760
Poaceae Oryza sativa 1 LOC_Os08g06520.2
Poaceae Paspalum vaginatum 1 gene-BS78_07G054700
Poaceae Sporobolus alterniflorus 4 Chr16G001760, Chr17G001610, Chr20G011540, Chr29G011060
Poaceae Thinopyrum elongatum 1 Tel5E01G592600
Poaceae Triticum dicoccoides 2 gene_TRIDC5AG054410, gene_TRIDC5BG058380
Poaceae Triticum aestivum 3 TraesCS5A02G372300.1, TraesCS5B02G374400.1 ...
TraesCS5D02G381800.1
Poaceae Zea mays 1 Zm00001eb415480_P001
Poaceae Zoysia japonica 2 nbis-gene-39017, nbis-gene-41666
Poaceae Zoysia macrostachya 2 Zma_g22522, Zma_g23659
Portulacaceae Portulaca oleracea 2 evm.TU.LG10.534, evm.TU.LG17.545
Posidoniaceae Posidonia oceanica 1 gene.Posoc07g01560
Rhizophoraceae Bruguiera sexangula 1 evm.TU.Scaffold_16_RagTag.625
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-24811
Rhizophoraceae Ceriops zippeliana 1 nbisL1-mrna-19052
Rhizophoraceae Kandelia candel 1 evm.TU.utg000022l.184
Rhizophoraceae Kandelia obovata 1 Maker00016082
Rhizophoraceae Rhizophora apiculata 1 nbisL1-mrna-197
Rhizophoraceae Rhizophora mangle 1 nbisL1-mrna-10455
Salicaceae Populus euphratica 1 populus_peu08155
Solanaceae Lycium barbarum 1 gene-LOC132604254
Solanaceae Solanum chilense 1 SOLCI004441900
Solanaceae Solanum pennellii 1 gene-LOC107005671
Tamaricaceae Reaumuria soongarica 1 MSTRG.8943_chr05_-
Tamaricaceae Tamarix chinensis 1 TC01G4682
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