Basic Information
Locus ID:
Zma_g23212
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Glycerophosphoryl diester phosphodiesterase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr13 | 12167817 | 12172676 | + | Zma_g23212 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 82,978.26 Da | 39.91 | 89.36 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 373 | 675 | 9.30019E-152 | - |
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 59 | 356 | 2.79871E-165 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 378 | 671 | 1.1E-30 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 58 | 356 | 1.67E-40 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 371 | 675 | 1.07E-45 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 372 | 676 | 1.1E-44 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 57 | 357 | 2.0E-34 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 59 | 357 | 25.178059 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 373 | 676 | 27.784611 | IPR030395 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55480.1 | SHV3-like 1. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. | 0 |
| RefSeq | XP_004973844.1 | glycerophosphodiester phosphodiesterase GDPDL4 isoform X1 [Setaria italica] | 0 |
| Q9FJ62 | Glycerophosphodiester phosphodiesterase GDPDL4 OS=Arabidopsis thaliana OX=3702 GN=GDPDL4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T427 | glycerophosphodiester phosphodiesterase OS=Eragrostis curvula OX=38414 GN=EJB05_48409 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology