Basic Information
Locus ID:
Zma_g2277
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr01 | 19080370 | 19083608 | - | Zma_g2277 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 76,467.37 Da | 58.05 | 65.38 | -0.85 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 622 | 662 | 5.88043E-19 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 620 | 667 | 2.5E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 622 | 668 | 2.32E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 596 | 673 | 9.1E-15 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 623 | 662 | 10.600894 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 416 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 417 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 370 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 150 | - | - |
| Coils | Coil | Coil | 598 | 618 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_022685551.1 | uncharacterized protein LOC101779219 [Setaria italica] | 0 |
| TrEMBL | A0A0A9DTT5 | RING-type domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology