Basic Information
Locus ID:
Zma_g21703
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Src homology 3 domains
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr12 | 12065244 | 12073516 | - | Zma_g21703 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 41,048.89 Da | 39.56 | 77.41 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 305 | 353 | 1.9E-9 | IPR001452 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 41 | 253 | 2.51E-24 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 269 | 355 | 9.42E-15 | IPR036028 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 40 | 262 | 1.4E-11 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 303 | 355 | 2.9E-15 | - |
| SMART | SM00326 | SH3_2 | 301 | 356 | 1.7E-12 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 298 | 357 | 18.715996 | IPR001452 |
| Coils | Coil | Coil | 239 | 259 | - | - |
| Coils | Coil | Coil | 144 | 171 | - | - |
| Coils | Coil | Coil | 215 | 235 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_025825964.1 | SH3 domain-containing protein 2-like [Panicum hallii] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7CY14 | SH3 domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_7G228700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology