Basic Information
Locus ID:
Zma_g21688
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr12 | 11969798 | 11974639 | + | Zma_g21688 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 70,748.76 Da | 43.21 | 96.46 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 64 | 6.0E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 92 | 152 | 9.2E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 352 | 618 | 2.5E-17 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 22 | 225 | 4.25E-40 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 336 | 620 | 1.22E-35 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 139 | 7.5E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 140 | 235 | 1.4E-18 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 324 | 430 | 1.1E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 432 | 636 | 2.0E-26 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 349 | 624 | 16.965759 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 258 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63430.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_025824322.1 | probable LRR receptor-like serine/threonine-protein kinase At1g63430 [Panicum hallii] | 0 |
| C0LGH8 | Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana OX=3702 GN=At1g63430 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TW64 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_38570 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH09.1708, BH09.1892, CH09.2036 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0309260, gene-QOZ80_4BG0340270 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0184300.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_007607, gene-QYE76_045198 |
| Poaceae | Oryza coarctata | 2 | Oco07G011610, Oco08G011260 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g45170.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G171100 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0301887, Pt_Chr0301907, Pt_Chr0301910 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr23G007910, Chr25G006520, Chr26G011800, Chr30G006370 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G638800 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG053330, gene_TRIDC2BG056190 |
| Poaceae | Triticum aestivum | 2 | TraesCS2A02G368700.2, TraesCS2B02G385900.1 |
| Poaceae | Zea mays | 1 | Zm00001eb075560_P005 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-5380 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g21688 |