Basic Information
Locus ID:
Zma_g21448
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Glycerophosphoryl diester phosphodiesterase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr12 | 10403016 | 10406698 | + | Zma_g21448 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 82,222.49 Da | 41.11 | 82.27 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 37 | 334 | 2.95005E-167 | - |
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 351 | 651 | 2.52861E-171 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 356 | 647 | 1.4E-43 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 350 | 651 | 5.23E-49 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 36 | 334 | 4.71E-39 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 349 | 652 | 8.8E-52 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 36 | 335 | 3.8E-30 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 37 | 335 | 34.418732 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 351 | 652 | 39.063431 | IPR030395 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 704 | 723 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 703 | 723 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55480.1 | SHV3-like 1. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. | 0 |
| RefSeq | NP_001168748.1 | Glycerophosphodiester phosphodiesterase GDPDL3 precursor [Zea mays] | 0 |
| Q9FJ62 | Glycerophosphodiester phosphodiesterase GDPDL4 OS=Arabidopsis thaliana OX=3702 GN=GDPDL4 PE=1 SV=1 | 0 | |
| TrEMBL | C0P8U6 | glycerophosphodiester phosphodiesterase OS=Zea mays OX=4577 GN=100382543 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology