Basic Information
Locus ID:
Zma_g20606
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr11 | 14423288 | 14424976 | - | Zma_g20606 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 61,743.50 Da | 43.07 | 76.55 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 220 | 346 | 2.59112E-12 | IPR002083 |
| CDD | cd00121 | MATH | 24 | 150 | 1.66853E-13 | IPR002083 |
| Pfam | PF00917 | MATH domain | 38 | 150 | 1.9E-4 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 380 | 492 | 8.8E-17 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 377 | 492 | 9.81E-19 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 217 | 352 | 3.11E-15 | - |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 19 | 153 | 7.68E-19 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 23 | 153 | 1.2E-17 | IPR008974 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 219 | 352 | 1.7E-11 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 365 | 524 | 1.1E-33 | IPR011333 |
| SMART | SM00225 | BTB_4 | 386 | 495 | 2.7E-15 | IPR000210 |
| SMART | SM00061 | math_3 | 25 | 132 | 0.0076 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 386 | 453 | 13.797939 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 20 | 149 | 14.35654 | IPR002083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 215 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 217 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_034585246.1 | BTB/POZ and MATH domain-containing protein 1-like [Setaria viridis] | 0 |
| TrEMBL | K3ZEL5 | BTB domain-containing protein OS=Setaria italica OX=4555 GN=101785763 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0300850, gene-QOZ80_4BG0331560 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr23G001920, Chr25G001520, Chr30G001520 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-23089 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g20606 |