Basic Information
Locus ID:
Zma_g20326
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
ABC transporter C family member 9
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr11 | 12788320 | 12795035 | + | Zma_g20326 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.19 | 170,833.48 Da | 40.63 | 101.74 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 952 | 1246 | 1.65259E-95 | IPR044726 |
| CDD | cd03250 | ABCC_MRP_domain1 | 637 | 837 | 6.88524E-108 | - |
| CDD | cd03244 | ABCC_MRP_domain2 | 1269 | 1489 | 1.06093E-123 | - |
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 323 | 611 | 4.64767E-101 | IPR044746 |
| Pfam | PF00005 | ABC transporter | 655 | 789 | 6.0E-19 | IPR003439 |
| Pfam | PF00005 | ABC transporter | 1288 | 1436 | 4.1E-29 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 327 | 590 | 5.7E-25 | IPR011527 |
| Pfam | PF00664 | ABC transporter transmembrane region | 959 | 1198 | 1.3E-32 | IPR011527 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 323 | 619 | 1.7E-32 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 632 | 854 | 5.33E-55 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 952 | 1251 | 3.92E-53 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1262 | 1498 | 1.45E-66 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 647 | 889 | 1.1E-68 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 1254 | 1507 | 5.5E-81 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 290 | 620 | 3.2E-46 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 916 | 1252 | 9.6E-61 | IPR036640 |
| SMART | SM00382 | AAA_5 | 664 | 837 | 1.6E-9 | IPR003593 |
| SMART | SM00382 | AAA_5 | 1297 | 1489 | 9.3E-10 | IPR003593 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 637 | 860 | 21.842182 | IPR003439 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1273 | 1505 | 17.106977 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 327 | 603 | 33.149006 | IPR011527 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 954 | 1234 | 38.079338 | IPR011527 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 762 | 776 | - | IPR017871 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 869 | 928 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 909 | 928 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 869 | 884 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60160.1 | multidrug resistance-associated protein 9. member of MRP subfamily | 0 |
| RefSeq | XP_021319479.1 | putative ABC transporter C family member 15 [Sorghum bicolor] | 0 |
| Q9M1C7 | ABC transporter C family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCC9 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1B6PMU2 | ABC transporter C family member 15 OS=Sorghum bicolor OX=4558 GN=SORBI_3006G195800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology