Basic Information
Locus ID:
Zma_g20147
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Src homology 3 domains
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr11 | 11567889 | 11571837 | - | Zma_g20147 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 43,062.10 Da | 41.28 | 79.41 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 325 | 373 | 3.3E-9 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 322 | 378 | 1.58E-14 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 41 | 273 | 2.09E-14 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 307 | 382 | 6.6E-15 | - |
| SMART | SM00326 | SH3_2 | 321 | 376 | 1.6E-12 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 318 | 377 | 18.549604 | IPR001452 |
| PRINTS | PR00499 | Neutrophil cytosol factor 2 signature | 343 | 359 | 2.5E-5 | - |
| PRINTS | PR00499 | Neutrophil cytosol factor 2 signature | 323 | 343 | 2.5E-5 | - |
| PRINTS | PR00499 | Neutrophil cytosol factor 2 signature | 359 | 372 | 2.5E-5 | - |
| Coils | Coil | Coil | 235 | 255 | - | - |
| Coils | Coil | Coil | 164 | 184 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_004976396.1 | SH3 domain-containing protein 2 [Setaria italica] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TV33 | SH3 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_38537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology