Basic Information
Locus ID:
Zma_g19820
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Short Name:
SERK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr11 | 9595493 | 9600037 | - | Zma_g19820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 69,369.19 Da | 35.72 | 94.24 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 73 | 3.4E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 309 | 579 | 1.1E-43 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 174 | 190 | 1.5 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 149 | 169 | 1.8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 209 | 4.34E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 287 | 583 | 4.13E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 277 | 384 | 1.3E-39 | - |
| Gene3D | G3DSA:1.20.5.510 | Single helix bin | 234 | 272 | 1.5E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 219 | 2.2E-62 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 385 | 602 | 4.1E-70 | - |
| SMART | SM00220 | serkin_6 | 308 | 582 | 6.4E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 308 | 595 | 36.555485 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 431 | 443 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 314 | 336 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71830.1 | somatic embryogenesis receptor-like kinase 1. Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. later | 0 |
| RefSeq | XP_040378931.1 | LRR receptor kinase SERK2 isoform X1 [Oryza brachyantha] | 0 |
| Q7XV05 | LRR receptor kinase SERK2 OS=Oryza sativa subsp. japonica OX=39947 GN=SERK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SGR3 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_56479 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology