Basic Information
Locus ID:
Zma_g19557
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr11 | 7713380 | 7714652 | - | Zma_g19557 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.45 | 36,389.11 Da | 47.39 | 76.31 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01753 | MYND finger | 289 | 328 | 4.6E-8 | IPR002893 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 287 | 334 | 5.23E-10 | - |
| SUPERFAMILY | SSF81901 | HCP-like | 115 | 231 | 9.42E-13 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 86 | 258 | 1.0E-16 | IPR011990 |
| Gene3D | G3DSA:6.10.140.2220 | - | 277 | 333 | 3.9E-11 | - |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 286 | 328 | 11.032289 | IPR002893 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67340.1 | HCP-like superfamily protein with MYND-type zinc finger. | 0 |
| RefSeq | XP_025823138.1 | F-box protein At5g50450-like [Panicum hallii] | 0 |
| Q9FYF9 | F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TRJ7 | MYND-type domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_37437 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology