Basic Information
Locus ID:
Zma_g19530
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Glycosyl hydrolases family 18
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr11 | 7431029 | 7432520 | - | Zma_g19530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.75 | 49,429.65 Da | 41.66 | 88.19 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 38 | 382 | 2.4E-47 | IPR001223 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 276 | 353 | 3.05E-12 | IPR029070 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 36 | 387 | 1.99E-47 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 53 | 382 | 9.7E-68 | - |
| Gene3D | G3DSA:3.10.50.10 | - | 275 | 353 | 9.7E-68 | IPR029070 |
| SMART | SM00636 | 2g34 | 35 | 382 | 9.3E-54 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 34 | 399 | 46.601707 | IPR001223 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 422 | 441 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19810.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_025825878.1 | class V chitinase-like [Panicum hallii] | 0 |
| A0A072UR65 | Class V chitinase CHIT5b OS=Medicago truncatula OX=3880 GN=CHIT5B PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TR83 | GH18 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_37293 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology