Basic Information
Locus ID:
Zma_g19215
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
RING-variant domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr11 | 621775 | 624022 | + | Zma_g19215 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.01 | 54,945.87 Da | 52.70 | 78.36 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 240 | 289 | 1.15847E-14 | - |
| Pfam | PF12906 | RING-variant domain | 240 | 288 | 1.3E-10 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 236 | 292 | 8.58E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 225 | 296 | 2.7E-15 | IPR013083 |
| SMART | SM00744 | ringv_2 | 239 | 289 | 6.1E-18 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 232 | 295 | 18.867231 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 96 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 475 | 496 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 512 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 96 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60580.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_039771355.1 | uncharacterized protein LOC120639561 isoform X6 [Panicum virgatum] | 0 |
| TrEMBL | A0A5J9T613 | RING-CH-type domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_46879 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology