Basic Information
Locus ID:
Zma_g19156
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Thaumatin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr10 | 11276771 | 11277475 | + | Zma_g19156 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.45 | 23,529.20 Da | 35.61 | 79.19 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00314 | Thaumatin family | 40 | 175 | 1.1E-18 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 35 | 224 | 1.44E-43 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 33 | 225 | 1.5E-35 | IPR037176 |
| SMART | SM00205 | tha2 | 36 | 224 | 6.8E-17 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 183 | 5.2E-25 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 179 | 234 | 0.013 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 33 | 224 | 16.682442 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 130 | 146 | 4.9E-6 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 35 | 47 | 4.9E-6 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 214 | 223 | 4.9E-6 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 93 | 122 | 4.9E-6 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38660.2 | Pathogenesis-related thaumatin superfamily protein. | 0 |
| RefSeq | XP_002450045.2 | uncharacterized protein LOC8086022 [Sorghum bicolor] | 0 |
| Q41350 | Osmotin-like protein OS=Solanum lycopersicum OX=4081 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1E5W412 | Osmotin-like protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0006857 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH04.2288, AH06.711, BH04.2359, CH04.2700 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_9AG0693120, gene-QOZ80_9BG0718890 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0358550.1.CDS1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_065465 |
| Poaceae | Oryza coarctata | 3 | Oco21G010080, Oco22G011390, Oco22G011400 |
| Poaceae | Oryza sativa | 2 | LOC_Os11g47670.1, LOC_Os11g47680.1 |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_05G264900, gene-BS78_05G282600, gene-BS78_K334800 ... |
| Poaceae | Sporobolus alterniflorus | 4 | Chr07G013680, Chr0G006710, Chr26G000200, Chr31G008700 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G222100 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC4AG028160 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G174300.1.cds1, TraesCS4B02G143200.1.cds1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb047690_P001, Zm00001eb164710_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-45970 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g19156 |