halophFGD

Basic Information

Locus ID: Zma_g19140

Species & Taxonomic ID: Zoysia macrostachya & 121788

Genome Assembly: GCA_049640385.1

Short Name: STS

Description: Raffinose synthase or seed imbibition protein Sip1

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Zma_chr10	11173607	11175530	+	Zma_g19140

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.29	65,051.75 Da	38.90	72.75	-0.28

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF05691	Raffinose synthase or seed imbibition protein Sip1	3	68	2.2E-17	IPR008811
Pfam	PF05691	Raffinose synthase or seed imbibition protein Sip1	70	571	7.6E-185	IPR008811
SUPERFAMILY	SSF51445	(Trans)glycosidases	71	475	1.54E-32	IPR017853
MobiDBLite	mobidb-lite	consensus disorder prediction	560	593	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	563	593	-	-
Coils	Coil	Coil	196	216	-	-

KEGG Pathway

KO Term:

K06611 (stachyose synthetase [EC:2.4.1.67])

Pathway:

ko00052 (Galactose metabolism) map00052 (Galactose metabolism)

Reaction:

R03418 (alpha-D-Galactosyl-(1->3)-1D-myo-inositol + Raffinose <=> myo-Inositol + Stachyose)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G01970.1	stachyose synthase. Encodes a putative stachyose synthetase.
RefSeq	XP_025826803.1	stachyose synthase-like [Panicum hallii]
Swiss-Prot	Q93XK2	Stachyose synthase OS=Pisum sativum OX=3888 GN=STS1 PE=1 SV=1
TrEMBL	A0A2T8IA99	galactinol--sucrose galactosyltransferase OS=Panicum hallii OX=206008 GN=PAHAL_8G255800 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	5	jg19854, jg28110, jg35104, jg40388, jg8984
Aizoaceae	Mesembryanthemum crystallinum	4	gene_13436, gene_13437, gene_13635, gene_985
Amaranthaceae	Atriplex hortensis	3	Ah000079, Ah020307, Ah024385
Amaranthaceae	Beta vulgaris	4	BVRB_1g011340, BVRB_5g117710, BVRB_5g122070, BVRB_5g122080
Amaranthaceae	Salicornia bigelovii	5	Sbi_jg30590, Sbi_jg31278, Sbi_jg31279, Sbi_jg57987 ... Sbi_jg57988
Amaranthaceae	Salicornia europaea	4	Seu_jg25617, Seu_jg25618, Seu_jg25619, Seu_jg28533
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00023720
Amaranthaceae	Suaeda glauca	5	Sgl10153, Sgl15305, Sgl15355, Sgl55177, Sgl60424
Amaranthaceae	Chenopodium album	4	gene:ENSEOMG00000013445, gene:ENSEOMG00000022624 ... gene:ENSEOMG00000033841, gene:ENSEOMG00000048008
Amaranthaceae	Chenopodium quinoa	5	CQ.Regalona.r1.1AG0014320, CQ.Regalona.r1.1BG0011720 ... CQ.Regalona.r1.5AG0027200, CQ.Regalona.r1.5BG0028840, CQ.Regalona.r1.5BG0028870
Anacardiaceae	Pistacia vera	4	pistato.v30007930, pistato.v30139670, pistato.v30139680 ... pistato.v30232990
Arecaceae	Cocos nucifera	2	COCNU_05G010740, COCNU_12G003120
Arecaceae	Phoenix dactylifera	2	gene-LOC103703782, gene-LOC103712674
Asparagaceae	Asparagus officinalis	4	AsparagusV1_01.2670.V1.1, AsparagusV1_02.2200.V1.1 ... AsparagusV1_08.2580.V1.1, AsparagusV1_08.3262.V1.1
Asteraceae	Flaveria trinervia	1	Ftri13G08300
Brassicaceae	Arabidopsis thaliana	2	AT4G01970.1, AT5G40390.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10027649m.g.v1.0, Thhalv10028420m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp6g01850.v2.2, Sp7g01530.v2.2
Brassicaceae	Brassica nigra	2	BniB01g026390.2N, BniB08g044420.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq02G1864, Ceq06G1062, Ceq09G1029
Casuarinaceae	Casuarina glauca	3	Cgl02G1944, Cgl06G1104, Cgl09G1118
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno02g14020
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate03g23380
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-10829, nbisL1-mrna-9591
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG04.474, evm.TU.LG05.317, evm.TU.LG10.274 ... evm.TU.LG10.693
Plantaginaceae	Plantago ovata	2	Pov_00016481, Pov_00024159
Plumbaginaceae	Limonium bicolor	2	Lb4G22466, Lb4G23439
Poaceae	Echinochloa crus-galli	7	AH02.504, AH04.2155, BH02.522, BH04.2309, BH04.2340 ... CH02.570, CH04.2600
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_1AG0011280, gene-QOZ80_1BG0059940 ... gene-QOZ80_2AG0111280, gene-QOZ80_2BG0164780
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.3HG0233820.1
Poaceae	Lolium multiflorum	2	gene-QYE76_015016, gene-QYE76_049960
Poaceae	Oryza coarctata	4	Oco01G002790, Oco02G002830, Oco21G009640, Oco22G010940
Poaceae	Oryza sativa	1	LOC_Os01g07530.1
Poaceae	Paspalum vaginatum	6	gene-BS78_03G050300, gene-BS78_05G254000, gene-BS78_K260800 ... gene-BS78_05G254900, gene-BS78_05G255300, gene-BS78_K341600
Poaceae	Puccinellia tenuiflora	8	Pt_Chr0200404, Pt_Chr0207407, Pt_Chr0300338, Pt_Chr0300373 ... Pt_Chr0505858, Pt_Chr0505861, Pt_Chr0505928, Pt_Chr0505946
Poaceae	Sporobolus alterniflorus	3	Chr02G019540, Chr03G005010, Chr05G010590
Poaceae	Thinopyrum elongatum	5	Tel1E01G732700, Tel1E01G733000, Tel1E01G733100 ... Tel3E01G162500, Telscf48101G000100
Poaceae	Triticum dicoccoides	4	gene_TRIDC1AG063820, gene_TRIDC1BG072990 ... gene_TRIDC3AG011150, gene_TRIDC3BG015040
Poaceae	Triticum aestivum	5	TraesCS1A02G434900.1, TraesCS1D02G444000.1 ... TraesCS3A02G092800.1, TraesCS3B02G108000.1, TraesCS3D02G092900.2
Poaceae	Zea mays	1	Zm00001eb122980_P001
Poaceae	Zoysia japonica	2	nbis-gene-13122, nbis-gene-46001
Poaceae	Zoysia macrostachya	3	Zma_g19135, Zma_g19140, Zma_g7677
Portulacaceae	Portulaca oleracea	14	evm.TU.LG01.1134, evm.TU.LG02.1274, evm.TU.LG02.1278 ... evm.TU.LG02.973, evm.TU.LG04.1367, evm.TU.LG04.1368, evm.TU.LG04.3479, evm.TU.LG05.1891, evm.TU.LG09.689, evm.TU.LG09.694, evm.TU.LG09.989, evm.TU.LG14.475, evm.TU.LG16.106, evm.TU.LG16.107
Posidoniaceae	Posidonia oceanica	5	gene.Posoc02g33670, gene.Posoc04g20950, gene.Posoc04g20960 ... gene.Posoc04g20980, gene.Posoc04g20990
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_3_RagTag.1900, evm.TU.Scaffold_4_RagTag.448 ... evm.TU.Scaffold_9_RagTag.735
Rhizophoraceae	Carallia pectinifolia	7	nbisL1-mrna-14730, nbisL1-mrna-14731, nbisL1-mrna-14732 ... nbisL1-mrna-21485, nbisL1-mrna-2339, nbisL1-mrna-2598, nbisL1-mrna-28914
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-10259, nbisL1-mrna-13219, nbisL1-mrna-20025
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-18555, nbisL1-mrna-18556, nbisL1-mrna-1880 ... nbisL1-mrna-3068
Rhizophoraceae	Kandelia candel	4	add.evm.TU.utg000003l.237, evm.TU.utg000003l.637 ... evm.TU.utg000008l.287, evm.TU.utg000019l.80
Rhizophoraceae	Kandelia obovata	1	Maker00001971
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-12053, nbisL1-mrna-1622
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-5306, nbisL1-mrna-8689
Salicaceae	Populus euphratica	8	populus_peu08408, populus_peu20798, populus_peu22653 ... populus_peu24068, populus_peu24069, populus_peu27367, populus_peu28687, populus_peu31353
Solanaceae	Lycium barbarum	2	gene-LOC132621444, gene-LOC132644922
Solanaceae	Solanum chilense	3	SOLCI000868600, SOLCI002260300, SOLCI007105400
Solanaceae	Solanum pennellii	3	gene-LOC107011548, gene-LOC107014142, gene-LOC107029126
Tamaricaceae	Reaumuria soongarica	2	gene_15987, gene_15988
Tamaricaceae	Tamarix chinensis	1	TC09G0971
Zosteraceae	Zostera marina	1	Zosma06g26930.v3.1