Basic Information
Locus ID:
Zma_g18814
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Cleavage site for pathogenic type III effector avirulence factor Avr
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr10 | 7470440 | 7472121 | - | Zma_g18814 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.18 | 17,720.53 Da | 57.86 | 38.44 | -1.14 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039776886.1 | uncharacterized protein LOC120644339 [Panicum virgatum] | 0 |
| TrEMBL | A0A5J9UNM6 | AvrRpt-cleavage domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_27945 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH04.1222, CH04.1416 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_9AG0680700 |
| Poaceae | Oryza coarctata | 3 | Oco21G005600, Oco21G005660, Oco22G006710 |
| Poaceae | Oryza sativa | 1 | LOC_Os11g29210.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_05G127800 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr31G004820 |
| Poaceae | Zea mays | 1 | Zm00001eb169750_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-38581 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18814 |