HalophFGD

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Basic Information
Locus ID: Zma_g18766
Species & Taxonomic ID: Zoysia macrostachya & 121788
Genome Assembly: GCA_049640385.1
Description: Ordered Locus Names sll0103
Maps and Mapping Data
Chromosome Start End Strand ID
Zma_chr10 6533301 6533630 - Zma_g18766
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.93 11,751.10 Da 44.80 76.51 -0.23
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF14624 VWA / Hh protein intein-like 1 49 4.1E-10 IPR032838
Best hit
Source Best Hit ID Description E-value
RefSeq XP_051190148.1 E3 ubiquitin-protein ligase WAV3-like [Lolium perenne] 0
TrEMBL A0A5J9URA6 VWFA domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_28082 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 15 gene_12183, gene_12187, gene_12188, gene_12189, gene_12190 ...
gene_12191, gene_12192, gene_12196, gene_15442, gene_17548, gene_17551, gene_17554, gene_24845, gene_24846, gene_25838
Amaranthaceae Beta vulgaris 3 BVRB_4g089380, BVRB_4g089440, BVRB_4g089470
Amaranthaceae Salicornia bigelovii 2 Sbi_jg18942, Sbi_jg37398
Amaranthaceae Salicornia europaea 1 Seu_jg5237
Amaranthaceae Suaeda aralocaspica 2 GOSA_00017413, GOSA_00019875
Amaranthaceae Suaeda glauca 2 Sgl71537, Sgl75115
Amaranthaceae Chenopodium album 2 gene:ENSEOMG00000007277, gene:ENSEOMG00000021246
Amaranthaceae Chenopodium quinoa 1 CQ.Regalona.r1.5BG0017610
Apiaceae Apium graveolens 4 Ag7G02069, Ag7G02073, Ag7G02075, Ag7G02079
Poaceae Echinochloa crus-galli 15 AH04.789, AH05.386, AH05.3867, AH05.387, AH05.521, AH05.524 ...
AH08.355, AH08.358, BH05.446, BH05.447, BH05.578, CH05.509, CH05.511, CH05.652, CH05.655
Poaceae Eleusine coracana subsp. coracana 8 gene-QOZ80_6AG0505720, gene-QOZ80_6BG0457760 ...
gene-QOZ80_9AG0677590, gene-QOZ80_9AG0681630, gene-QOZ80_9AG0681670, gene-QOZ80_9AG0681840, gene-QOZ80_9BG0701280, gene-QOZ80_9BG0706470
Poaceae Hordeum vulgare 6 HORVU.MOREX.r3.4HG0332610.1, HORVU.MOREX.r3.5HG0420760.1 ...
HORVU.MOREX.r3.5HG0420790.1, HORVU.MOREX.r3.7HG0635350.1.CDS1, HORVU.MOREX.r3.7HG0635360.1.CDS1, HORVU.MOREX.r3.7HG0728740.1
Poaceae Lolium multiflorum 6 gene-QYE76_002231, gene-QYE76_004209, gene-QYE76_019239 ...
gene-QYE76_032850, gene-QYE76_032851, gene-QYE76_065541
Poaceae Oryza coarctata 6 Oco01G015500, Oco01G015510, Oco02G015830, Oco06G016040 ...
Oco06G016050, Oco12G004370
Poaceae Oryza sativa 2 LOC_Os01g45320.1, LOC_Os03g28990.1
Poaceae Paspalum vaginatum 3 gene-BS78_05G190100, gene-BS78_05G197900, gene-BS78_K170600
Poaceae Puccinellia tenuiflora 4 Pt_Chr0404275, Pt_Chr0405768, Pt_Chr0405771, Pt_Chr0702313
Poaceae Sporobolus alterniflorus 6 Chr0G006700, Chr16G006940, Chr16G006950, Chr17G006340 ...
Chr18G002690, Chr26G000180
Poaceae Thinopyrum elongatum 7 Tel2E01G057200, Tel2E01G058700, Tel3E01G845300 ...
Tel5E01G025900, Tel6E01G021000, Tel7E01G709900, Tel7E01G748900
Poaceae Triticum dicoccoides 6 gene_TRIDC2AG001950, gene_TRIDC4AG072190 ...
gene_TRIDC6AG000790, gene_TRIDC7AG000950, gene_TRIDC7AG001150, gene_TRIDC7AG059450
Poaceae Triticum aestivum 19 TraesCS2B02G026900.1, TraesCS3B02G577600.1 ...
TraesCS3D02G516600.1, TraesCS4A02G484700.1.cds1, TraesCS5A02G011500.1, TraesCS5A02G011700.1, TraesCS5B02G009400.1, TraesCS5B02G009600.1, TraesCS5D02G016400.1, TraesCS5D02G016600.1, TraesCS6A02G006500.1, TraesCS6D02G009300.1, TraesCS7A02G010300.1.cds1, TraesCS7A02G426800.1, TraesCS7B02G327100.1, TraesCS7B02G344600.1, TraesCS7D02G010200.1.cds1, TraesCS7D02G418800.1, TraesCS7D02G434400.1
Poaceae Zea mays 2 Zm00001eb411520_P001, Zm00001eb418460_P001
Poaceae Zoysia japonica 4 nbis-gene-38561, nbis-gene-38567, nbis-gene-38695 ...
nbis-gene-44305
Poaceae Zoysia macrostachya 4 Zma_g17879, Zma_g18023, Zma_g18766, Zma_g18826
Portulacaceae Portulaca oleracea 7 evm.TU.LG02.533, evm.TU.LG02.537, evm.TU.LG02.541 ...
evm.TU.LG09.1774, evm.TU.LG09.1777, evm.TU.LG09.1781, evm.TU.LG09.1785
Tamaricaceae Tamarix chinensis 5 TC04G1425, TC04G1430, TC04G1446, TC04G1452, TC04G1460
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.