Basic Information
Locus ID:
Zma_g18762
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr10 | 6461396 | 6465089 | + | Zma_g18762 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 97,872.17 Da | 31.74 | 92.17 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 589 | 861 | 4.80632E-92 | - |
| Pfam | PF13855 | Leucine rich repeat | 375 | 428 | 2.9E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 586 | 856 | 5.9E-51 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 53 | 318 | 6.12E-42 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 336 | 435 | 2.51E-15 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 563 | 858 | 1.95E-81 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 328 | 449 | 2.1E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 544 | 659 | 5.7E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 660 | 878 | 1.3E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 323 | 4.4E-69 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 111 | 134 | 0.064 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 184 | 207 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 391 | 414 | 5.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 88 | 110 | 82.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 583 | 866 | 3.7E-49 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 583 | 862 | 41.770931 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 707 | 719 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 589 | 610 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 449 | 474 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G24650.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_025827113.1 | receptor-like kinase TMK4 [Panicum hallii] | 0 |
| Q2R560 | Receptor protein kinase WSS1 OS=Oryza sativa subsp. japonica OX=39947 GN=WSS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9UQG0 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_28090 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH04.1153, CH04.1339 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_4BG0351990, gene-QOZ80_9AG0681760 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0374020.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_067050 |
| Poaceae | Oryza coarctata | 2 | Oco21G005150, Oco22G006180 |
| Poaceae | Oryza sativa | 2 | LOC_Os08g41430.1, LOC_Os11g26130.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_05G135600 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr05G021660, Chr07G018000, Chr31G004400 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G266400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG023700, gene_TRIDC4BG025710 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G147700.1, TraesCS4B02G165600.1.cds1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb112700_P001, Zm00001eb169350_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-38701 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18762 |