Basic Information
Locus ID:
Zma_g18707
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr10 | 4942074 | 4950034 | - | Zma_g18707 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 44,234.99 Da | 48.25 | 91.31 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 77 | 339 | 1.5E-114 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 79 | 339 | 1.35E-53 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 103 | 402 | 3.7E-97 | IPR027417 |
| SMART | SM00382 | AAA_5 | 127 | 301 | 9.2E-6 | IPR003593 |
| TIGRFAM | TIGR02012 | tigrfam_recA: protein RecA | 75 | 380 | 1.1E-116 | IPR013765 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 105 | 264 | 36.710079 | IPR020588 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 274 | 339 | 22.352921 | IPR020587 |
| ProSitePatterns | PS00321 | recA signature. | 286 | 294 | - | IPR020584 |
| PRINTS | PR00142 | RecA protein signature | 316 | 345 | 8.1E-69 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 283 | 311 | 8.1E-69 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 235 | 264 | 8.1E-69 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 197 | 226 | 8.1E-69 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 163 | 192 | 8.1E-69 | IPR013765 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 370 | 405 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 370 | 394 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19490.1 | recA DNA recombination family protein. | 0 |
| RefSeq | XP_015615298.1 | uncharacterized protein LOC4350329 [Oryza sativa Japonica Group] | 0 |
| Q9ZUP2 | DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g19490 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9UPU2 | DNA repair protein recA homolog 3, mitochondrial OS=Eragrostis curvula OX=38414 GN=EJB05_28260 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology