Basic Information
Locus ID:
Zma_g18587
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr10 | 2445120 | 2446259 | + | Zma_g18587 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.97 | 40,786.71 Da | 42.74 | 67.81 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 175 | 221 | 5.9E-11 | IPR006652 |
| Pfam | PF00646 | F-box domain | 27 | 59 | 3.6E-8 | IPR001810 |
| SUPERFAMILY | SSF117281 | Kelch motif | 104 | 366 | 2.62E-44 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 23 | 65 | 2.62E-8 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 54 | 297 | 6.4E-38 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 298 | 377 | 9.0E-6 | IPR015915 |
| SMART | SM00612 | kelc_smart | 138 | 186 | 1.7E-4 | IPR006652 |
| SMART | SM00612 | kelc_smart | 187 | 236 | 9.9E-5 | IPR006652 |
| SMART | SM00612 | kelc_smart | 237 | 286 | 8.7 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | NP_001309040.1 | F-box/kelch-repeat protein At2g44130-like [Zea mays] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1E5VAS5 | F-box/kelch-repeat protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0016726 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology