Basic Information
Locus ID:
Zma_g1831
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr01 | 16333462 | 16336138 | - | Zma_g1831 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.70 | 66,504.39 Da | 31.61 | 87.58 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 23 | 116 | 1.6E-5 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 210 | 457 | 3.0E-86 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 24 | 116 | 1.41E-15 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 20 | 119 | 1.0E-11 | IPR011333 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 29 | 96 | 10.137225 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 210 | 481 | 88.958549 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 529 | 608 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 575 | 608 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G14820.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_039829525.1 | BTB/POZ domain-containing protein NPY4-like [Panicum virgatum] | 0 |
| O80970 | Phototropic-responsive NPH3 family protein NPY2 OS=Arabidopsis thaliana OX=3702 GN=NPY2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T0N1B2 | BTB/POZ domain-containing protein NPY2 OS=Panicum virgatum OX=38727 GN=PVAP13_9NG652100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology