Basic Information
Locus ID:
Zma_g18187
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr09 | 10648905 | 10652063 | - | Zma_g18187 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 41,604.97 Da | 34.50 | 88.85 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 154 | 233 | 2.1E-5 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 319 | 349 | 0.24 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 95 | 351 | 3.48E-31 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 10 | 356 | 1.7E-61 | IPR015943 |
| SMART | SM00320 | WD40_4 | 137 | 175 | 0.063 | IPR001680 |
| SMART | SM00320 | WD40_4 | 179 | 217 | 24.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 82 | 120 | 230.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 269 | 308 | 21.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 312 | 351 | 0.017 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 185 | 226 | 8.637032 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50550.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_025827591.1 | SEC12-like protein 2 isoform X1 [Panicum hallii] | 0 |
| Q39221 | SEC12-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=STL2P PE=1 SV=4 | 0 | |
| TrEMBL | A0A5J9V368 | ANAPC4_WD40 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_21951 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology