Basic Information
Locus ID:
Zma_g18097
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr09 | 9827978 | 9840218 | - | Zma_g18097 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 131,231.92 Da | 43.86 | 80.86 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 63 | 179 | 2.55159E-34 | IPR002083 |
| CDD | cd02659 | peptidase_C19C | 204 | 532 | 1.34752E-165 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 206 | 527 | 7.9E-48 | IPR001394 |
| Pfam | PF14533 | Ubiquitin-specific protease C-terminal | 892 | 1101 | 4.5E-55 | IPR029346 |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 631 | 882 | 3.1E-73 | IPR024729 |
| Pfam | PF00917 | MATH domain | 69 | 188 | 2.5E-19 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 59 | 191 | 1.06E-39 | - |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 201 | 557 | 1.84E-96 | IPR038765 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 59 | 201 | 3.5E-50 | IPR008974 |
| Gene3D | G3DSA:3.10.20.90 | - | 691 | 808 | 2.7E-41 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 809 | 905 | 2.2E-25 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 202 | 531 | 9.8E-90 | - |
| SMART | SM00061 | math_3 | 63 | 167 | 1.5E-20 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 61 | 186 | 37.599213 | IPR002083 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 206 | 530 | 40.503819 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 446 | 463 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 207 | 222 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 61 | - | - |
| Coils | Coil | Coil | 546 | 570 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G11910.1 | ubiquitin-specific protease 13. | 0 |
| RefSeq | XP_034607286.1 | ubiquitin carboxyl-terminal hydrolase 12-like isoform X3 [Setaria viridis] | 0 |
| Q84WU2 | Ubiquitin C-terminal hydrolase 13 OS=Arabidopsis thaliana OX=3702 GN=UBP13 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9UMG0 | ubiquitinyl hydrolase 1 (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_27399 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology