HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Zma_g18074
Species & Taxonomic ID: Zoysia macrostachya & 121788
Genome Assembly: GCA_049640385.1
Description: ubiE/COQ5 methyltransferase family
Maps and Mapping Data
Chromosome Start End Strand ID
Zma_chr09 9435993 9437893 + Zma_g18074
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.86 28,409.66 Da 42.46 74.70 -0.33
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd02440 AdoMet_MTases 54 171 1.83489E-16 -
Pfam PF13847 Methyltransferase domain 51 171 8.2E-19 IPR025714
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases 20 206 9.49E-31 IPR029063
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39 12 223 4.3E-62 -
Best hit
Source Best Hit ID Description E-value
TAIR AT4G34360.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. 0
RefSeq XP_006662981.1 EEF1A lysine methyltransferase 4 [Oryza brachyantha] 0
Swiss-Prot P0DPE1 EEF1A lysine methyltransferase 4 OS=Bos taurus OX=9913 GN=EEF1AKMT4 PE=2 SV=1 0
TrEMBL J3N918 Methyltranfer_dom domain-containing protein OS=Oryza brachyantha OX=4533 GN=102704840 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 1 jg1026
Aizoaceae Mesembryanthemum crystallinum 3 gene_21611, gene_21613, gene_21614
Amaranthaceae Atriplex hortensis 1 Ah010306
Amaranthaceae Beta vulgaris 1 BVRB_9g218050
Amaranthaceae Salicornia bigelovii 1 Sbi_jg45826
Amaranthaceae Salicornia europaea 1 Seu_jg20185
Amaranthaceae Suaeda aralocaspica 1 GOSA_00022406
Amaranthaceae Suaeda glauca 4 Sgl00016, Sgl02376, Sgl05084, Sgl07505
Amaranthaceae Chenopodium album 3 gene:ENSEOMG00000018703, gene:ENSEOMG00000037783 ...
gene:ENSEOMG00000051036
Amaranthaceae Chenopodium quinoa 7 CQ.Regalona.r1.4AG0009850, CQ.Regalona.r1.7BG0008160 ...
CQ.Regalona.r1.8AG0013860, CQ.Regalona.r1.8AG0017900, CQ.Regalona.r1.8AG0020610, CQ.Regalona.r1.9AG0016340, CQ.Regalona.r1.9AG0016350
Anacardiaceae Pistacia vera 1 pistato.v30113740
Apiaceae Apium graveolens 1 Ag9G00119
Arecaceae Cocos nucifera 1 scaffold025950G000010
Arecaceae Phoenix dactylifera 1 gene-LOC103723941
Asparagaceae Asparagus officinalis 1 AsparagusV1_03.2253.V1.1
Asteraceae Flaveria trinervia 1 Ftri15G07064
Brassicaceae Arabidopsis thaliana 1 AT4G34360.1
Brassicaceae Eutrema salsugineum 1 Thhalv10026003m.g.v1.0
Brassicaceae Schrenkiella parvula 1 Sp7g32150.v2.2
Brassicaceae Brassica nigra 1 BniB05g003950.2N
Casuarinaceae Casuarina equisetifolia 1 Ceq09G0041
Casuarinaceae Casuarina glauca 1 Cgl09G0047
Cymodoceaceae Cymodocea nodosa 1 gene.Cymno11g03410
Dunaliellaceae Dunaliella salina 1 Dusal.0194s00010.v1.0
Nitrariaceae Nitraria sibirica 1 evm.TU.LG08.90
Plantaginaceae Plantago ovata 1 Pov_00035659
Plumbaginaceae Limonium bicolor 2 Lb3G17218, Lb3G17225
Poaceae Echinochloa crus-galli 4 AH04.1633, AH07.1863, BH04.1646, CH04.1879
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_9AG0685390, gene-QOZ80_9BG0711520
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.2HG0125940.1, HORVU.MOREX.r3.7HG0703680.1
Poaceae Lolium multiflorum 3 gene-QYE76_038626, gene-QYE76_059193, gene-QYE76_066570
Poaceae Oryza coarctata 2 Oco21G007300, Oco22G008430
Poaceae Oryza sativa 1 LOC_Os11g35340.1
Poaceae Paspalum vaginatum 2 gene-BS78_05G169700, gene-BS78_05G169900
Poaceae Puccinellia tenuiflora 2 Pt_Chr0103119, Pt_Chr0103125
Poaceae Sporobolus alterniflorus 1 Chr31G006780
Poaceae Thinopyrum elongatum 1 Tel2E01G335200
Poaceae Triticum dicoccoides 2 gene_TRIDC2AG021730, gene_TRIDC2BG026300
Poaceae Triticum aestivum 3 TraesCS2A02G171500.1, TraesCS2B02G197900.1 ...
TraesCS2D02G179100.1
Poaceae Zea mays 1 Zm00001eb201910_P001
Poaceae Zoysia japonica 1 nbis-gene-44235
Poaceae Zoysia macrostachya 1 Zma_g18074
Portulacaceae Portulaca oleracea 2 evm.TU.LG02.403, evm.TU.LG09.1645
Posidoniaceae Posidonia oceanica 1 gene.Posoc04g06500
Rhizophoraceae Bruguiera sexangula 1 evm.TU.Scaffold_1_RagTag.2164
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-5974
Rhizophoraceae Ceriops tagal 1 nbisL1-mrna-16917
Rhizophoraceae Ceriops zippeliana 1 nbisL1-mrna-3376
Rhizophoraceae Kandelia candel 1 evm.TU.utg000016l.173
Rhizophoraceae Kandelia obovata 1 Maker00016774
Rhizophoraceae Rhizophora apiculata 1 nbisL1-mrna-4734
Rhizophoraceae Rhizophora mangle 1 nbisL1-mrna-14088
Salicaceae Populus euphratica 1 populus_peu08916
Solanaceae Lycium barbarum 1 gene-LOC132599137
Solanaceae Solanum chilense 1 SOLCI003002300
Solanaceae Solanum pennellii 2 gene-LOC107002689, gene-LOC114078438
Tamaricaceae Reaumuria soongarica 1 gene_7809
Tamaricaceae Tamarix chinensis 1 TC10G0525
Zosteraceae Zostera marina 1 Zosma06g06980.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.