Basic Information
Locus ID:
Zma_g1807
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr01 | 16207968 | 16210391 | - | Zma_g1807 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.51 | 42,304.05 Da | 57.20 | 83.26 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13445 | RING-type zinc-finger | 171 | 223 | 1.4E-6 | IPR027370 |
| SUPERFAMILY | SSF57850 | RING/U-box | 167 | 228 | 6.8E-9 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 160 | 263 | 2.9E-10 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 171 | 226 | 10.055033 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 190 | 199 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 69 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G29270.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_002468299.1 | uncharacterized protein LOC8081845 [Sorghum bicolor] | 0 |
| TrEMBL | A0A5J9WH01 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_07590 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology