Basic Information
Locus ID:
Zma_g17881
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Short Name:
UBP5
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr09 | 6079394 | 6090695 | + | Zma_g17881 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 101,833.93 Da | 49.37 | 81.75 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 734 | 889 | 1.88791E-62 | - |
| Pfam | PF14533 | Ubiquitin-specific protease C-terminal | 491 | 643 | 1.3E-9 | IPR029346 |
| Pfam | PF06337 | DUSP domain | 33 | 134 | 9.2E-24 | IPR006615 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 317 | 888 | 6.0E-86 | IPR001394 |
| SUPERFAMILY | SSF143791 | DUSP-like | 11 | 134 | 3.14E-27 | IPR035927 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 315 | 891 | 5.89E-110 | IPR038765 |
| Gene3D | G3DSA:3.10.20.90 | - | 147 | 233 | 6.1E-13 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 309 | 547 | 1.4E-64 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 665 | 896 | 4.7E-58 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 3 | 146 | 1.2E-35 | - |
| SMART | SM00695 | dusp | 29 | 136 | 4.1E-31 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 317 | 891 | 55.553101 | IPR028889 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 10 | 133 | 19.131096 | IPR006615 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 318 | 333 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 833 | 850 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40930.1 | ubiquitin-specific protease 5. Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation. | 0 |
| RefSeq | XP_004979260.1 | ubiquitin carboxyl-terminal hydrolase 5 [Setaria italica] | 0 |
| O22207 | Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=UBP5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9UP27 | Ubiquitin carboxyl-terminal hydrolase OS=Eragrostis curvula OX=38414 GN=EJB05_27992 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology