Basic Information
Locus ID:
Zma_g17728
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr09 | 2365591 | 2366697 | + | Zma_g17728 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.62 | 39,525.24 Da | 38.84 | 67.99 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 164 | 210 | 4.8E-11 | IPR006652 |
| Pfam | PF00646 | F-box domain | 16 | 48 | 2.9E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 54 | 5.36E-9 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 93 | 355 | 1.24E-44 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 289 | 367 | 2.7E-5 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 52 | 288 | 6.9E-39 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 17 | 51 | 4.3E-5 | - |
| SMART | SM00612 | kelc_smart | 226 | 275 | 8.3 | IPR006652 |
| SMART | SM00612 | kelc_smart | 127 | 175 | 3.4E-5 | IPR006652 |
| SMART | SM00612 | kelc_smart | 176 | 225 | 1.7E-5 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_004978976.1 | F-box/kelch-repeat protein At2g44130 [Setaria italica] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1E5VAS5 | F-box/kelch-repeat protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0016726 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology