Basic Information
Locus ID:
Zma_g16830
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr08 | 19677005 | 19680832 | + | Zma_g16830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 99,186.80 Da | 47.03 | 76.97 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 40 | 195 | 1.06677E-46 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 824 | 865 | 7.03294E-23 | - |
| Pfam | PF00069 | Protein kinase domain | 528 | 762 | 1.9E-41 | IPR000719 |
| Pfam | PF04564 | U-box domain | 820 | 889 | 3.5E-15 | IPR003613 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 49 | 158 | 1.0E-6 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 814 | 889 | 7.33E-22 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 499 | 785 | 8.36E-65 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 598 | 807 | 8.5E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 502 | 597 | 6.1E-23 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 39 | 187 | 5.1E-6 | IPR014729 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 819 | 890 | 5.2E-27 | IPR013083 |
| SMART | SM00220 | serkin_6 | 525 | 796 | 8.3E-27 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 823 | 886 | 3.4E-28 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 525 | 796 | 34.930073 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 819 | 890 | 35.331493 | IPR003613 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 643 | 655 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 531 | 552 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 207 | 267 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 267 | - | - |
| Coils | Coil | Coil | 419 | 439 | - | - |
| Coils | Coil | Coil | 463 | 495 | - | - |
| Coils | Coil | Coil | 353 | 373 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_025801782.1 | U-box domain-containing protein 33-like isoform X1 [Panicum hallii] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9UZR7 | RING-type E3 ubiquitin transferase OS=Eragrostis curvula OX=38414 GN=EJB05_20324 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology