Basic Information
Locus ID:
Zma_g16658
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
AT hook motif family protein, expressed
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr08 | 18395305 | 18401948 | - | Zma_g16658 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.38 | 80,980.06 Da | 47.34 | 60.54 | -1.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 519 | 563 | 0.00569767 | IPR002999 |
| SUPERFAMILY | SSF48371 | ARM repeat | 72 | 266 | 7.2E-8 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 520 | 560 | 9.03E-8 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 34 | 259 | 1.3E-5 | IPR011989 |
| Gene3D | G3DSA:2.30.30.140 | - | 511 | 568 | 1.7E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 303 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 521 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 344 | 358 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 484 | 508 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 691 | 727 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 634 | 682 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 582 | 620 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 573 | 746 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 411 | 468 | - | - |
| Coils | Coil | Coil | 6 | 26 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_025804893.1 | microtubule-associated protein futsch-like isoform X3 [Panicum hallii] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S3GQX7 | Tudor domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_1G304900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology