Basic Information
Locus ID:
Zma_g16584
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Glycerophosphoryl diester phosphodiesterase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr08 | 17836124 | 17840644 | + | Zma_g16584 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 81,428.08 Da | 35.11 | 87.63 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 45 | 342 | 6.05458E-172 | - |
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 359 | 660 | 7.89949E-157 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 364 | 656 | 1.9E-44 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 358 | 660 | 7.06E-50 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 44 | 342 | 1.83E-31 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 44 | 342 | 9.0E-24 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 357 | 661 | 2.9E-51 | IPR017946 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 28 | 6.0 | - |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 359 | 661 | 37.691132 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 45 | 343 | 25.852028 | IPR030395 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26690.1 | PLC-like phosphodiesterase family protein. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. | 0 |
| RefSeq | XP_039790225.1 | glycerophosphodiester phosphodiesterase GDPDL3-like [Panicum virgatum] | 0 |
| Q9SZ11 | Glycerophosphodiester phosphodiesterase GDPDL3 OS=Arabidopsis thaliana OX=3702 GN=GDPDL3 PE=2 SV=3 | 0 | |
| TrEMBL | A0A5J9V0R4 | glycerophosphodiester phosphodiesterase OS=Eragrostis curvula OX=38414 GN=EJB05_21061 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology