Basic Information
Locus ID:
Zma_g15860
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr08 | 9337790 | 9348981 | - | Zma_g15860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 104,979.26 Da | 40.92 | 84.37 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 752 | 907 | 4.37761E-59 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 313 | 906 | 6.5E-84 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 41 | 137 | 2.6E-21 | IPR006615 |
| SUPERFAMILY | SSF143791 | DUSP-like | 15 | 137 | 8.24E-26 | IPR035927 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 310 | 909 | 2.35E-110 | IPR038765 |
| Gene3D | G3DSA:3.30.2230.10 | - | 12 | 150 | 1.2E-32 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 677 | 917 | 4.6E-58 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 297 | 535 | 3.7E-66 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 151 | 236 | 7.2E-9 | - |
| SMART | SM00695 | dusp | 37 | 140 | 9.7E-21 | IPR006615 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 18 | 137 | 18.169567 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 312 | 909 | 58.027935 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 313 | 328 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 851 | 868 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10570.1 | ubiquitin-specific protease 9. encodes a ubiquitin-specific protease family member, UBP9. | 0 |
| RefSeq | XP_002464716.1 | ubiquitin carboxyl-terminal hydrolase 9 [Sorghum bicolor] | 0 |
| Q9ZSB5 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=UBP10 PE=2 SV=2 | 0 | |
| TrEMBL | A0A811MHL3 | Ubiquitin carboxyl-terminal hydrolase OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS2823 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology