Basic Information
Locus ID:
Zma_g15836
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Glycosyl hydrolases family 38 C-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr08 | 8803689 | 8817460 | - | Zma_g15836 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 113,476.88 Da | 34.12 | 81.69 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 52 | 329 | 1.49249E-174 | - |
| Pfam | PF09261 | Alpha mannosidase middle domain | 370 | 462 | 9.5E-18 | IPR015341 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 617 | 829 | 8.6E-52 | IPR011682 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 911 | 1016 | 3.3E-9 | IPR041147 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 53 | 365 | 2.9E-91 | IPR000602 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 467 | 1019 | 6.12E-147 | IPR011013 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 46 | 367 | 1.47E-108 | IPR011330 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 369 | 464 | 9.81E-26 | IPR028995 |
| Gene3D | G3DSA:2.70.98.30 | - | 611 | 877 | 5.7E-102 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 334 | 412 | 4.2E-29 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1180 | - | 478 | 589 | 4.6E-26 | IPR013780 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 413 | 469 | 1.7E-19 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1360 | - | 898 | 1019 | 2.9E-33 | - |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 52 | 333 | 4.3E-117 | IPR027291 |
| SMART | SM00872 | Alpha_mann_mid_2 | 370 | 444 | 9.5E-20 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66150.2 | - | 0 |
| RefSeq | XP_039828828.1 | alpha-mannosidase-like [Panicum virgatum] | 0 |
| C0HJB3 | Alpha-mannosidase OS=Canavalia ensiformis OX=3823 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0MPY8 | Alpha-mannosidase OS=Panicum virgatum OX=38727 GN=PVAP13_9NG361100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology