Basic Information
Locus ID:
Zma_g15148
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Short Name:
EBF1
Description:
Leucine-rich repeat - CC (cysteine-containing) subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr08 | 2218182 | 2220270 | - | Zma_g15148 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 68,715.97 Da | 44.88 | 106.58 | 0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 67 | 106 | 2.6E-4 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 223 | 246 | 0.77 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 381 | 403 | 0.39 | IPR001611 |
| SUPERFAMILY | SSF81383 | F-box domain | 64 | 102 | 9.16E-7 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 304 | 650 | 2.62E-33 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 186 | 317 | 1.45E-13 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 59 | 299 | 2.5E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 326 | 436 | 1.3E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 454 | 651 | 5.0E-34 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 407 | 432 | 720.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 514 | 539 | 4.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 355 | 380 | 13.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 249 | 274 | 0.025 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 223 | 248 | 9.5E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 381 | 406 | 7.0E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 487 | 512 | 0.12 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 168 | 196 | 280.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 461 | 486 | 36.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 567 | 591 | 6.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 593 | 618 | 230.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 197 | 222 | 43.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 619 | 644 | 180.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 275 | 300 | 11.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 541 | 566 | 0.0014 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25350.1 | EIN3-binding F box protein 2. Arabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway. | 0 |
| RefSeq | XP_025798413.1 | EIN3-binding F-box protein 2-like [Panicum hallii] | 0 |
| Q708Y0 | EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1E5VY32 | EIN3-binding F-box protein 1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0008956 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology