Basic Information
Locus ID:
Zma_g15111
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
LysM domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr08 | 1981877 | 1983919 | + | Zma_g15111 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 71,513.99 Da | 34.96 | 89.88 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 202 | 238 | 5.72706E-4 | IPR018392 |
| Pfam | PF01476 | LysM domain | 204 | 239 | 4.1E-4 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 409 | 652 | 5.6E-34 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 389 | 654 | 2.85E-57 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 445 | 667 | 5.1E-52 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 184 | 247 | 1.4E-6 | IPR036779 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 340 | 444 | 2.1E-11 | - |
| ProSiteProfiles | PS51782 | LysM domain profile. | 194 | 238 | 9.167186 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 353 | 663 | 30.887749 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 271 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 265 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039788555.1 | protein LYK5-like [Panicum virgatum] | 0 |
| O22808 | Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3L6RXM9 | Protein LYK5-like OS=Panicum miliaceum OX=4540 GN=C2845_PM11G00210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology