Basic Information
Locus ID:
Zma_g15069
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Ubiquitin fusion degradation protein UFD1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr08 | 1710988 | 1713776 | + | Zma_g15069 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 34,903.37 Da | 49.91 | 68.63 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 15 | 186 | 5.3E-79 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 111 | 184 | 1.2E-34 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 8 | 109 | 3.4E-42 | IPR042299 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 303 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 220 | 313 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_004951680.1 | ubiquitin fusion degradation protein 1 homolog [Setaria italica] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A4U6W530 | Ubiquitin fusion degradation protein 1 homolog OS=Setaria viridis OX=4556 GN=SEVIR_1G061300v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology