Basic Information
Locus ID:
Zma_g15054
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr08 | 1605234 | 1605824 | - | Zma_g15054 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.13 | 20,178.31 Da | 61.91 | 87.45 | 0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 145 | 187 | 3.0E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 144 | 192 | 9.13E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 115 | 193 | 1.8E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 145 | 186 | 3.5E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 145 | 187 | 12.297489 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 36 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30370.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_025811138.1 | RING-H2 finger protein ATL56-like [Panicum hallii] | 0 |
| Q9M0C3 | RING-H2 finger protein ATL14 OS=Arabidopsis thaliana OX=3702 GN=ATL14 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9STY2 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_52109 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology