Basic Information
Locus ID:
Zma_g14623
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
CAF1 family ribonuclease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr07 | 22924334 | 22925188 | + | Zma_g14623 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.83 | 31,593.54 Da | 36.51 | 90.63 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04857 | CAF1 family ribonuclease | 24 | 146 | 4.2E-7 | IPR006941 |
| Pfam | PF04857 | CAF1 family ribonuclease | 170 | 252 | 3.8E-6 | IPR006941 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 21 | 275 | 3.52E-87 | IPR012337 |
| Gene3D | G3DSA:3.30.420.10 | - | 10 | 279 | 1.9E-96 | IPR036397 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32070.1 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein. | 0 |
| RefSeq | XP_025810928.1 | probable CCR4-associated factor 1 homolog 7 [Panicum hallii] | 0 |
| Q9SKZ2 | Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9UWE2 | poly(A)-specific ribonuclease (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_19406 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology