Basic Information
Locus ID:
Zma_g14508
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr07 | 22107084 | 22108235 | + | Zma_g14508 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 34,792.78 Da | 68.10 | 56.92 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16667 | RING-H2_RNF126_like | 184 | 226 | 1.4752E-25 | - |
| Pfam | PF14369 | zinc-ribbon | 15 | 48 | 4.4E-12 | IPR039525 |
| Pfam | PF13639 | Ring finger domain | 184 | 226 | 1.8E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 165 | 232 | 5.08E-23 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 148 | 232 | 1.6E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 185 | 225 | 6.7E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 185 | 226 | 12.371254 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 128 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 237 | 251 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 129 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60360.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_008646313.1 | probable E3 ubiquitin-protein ligase RHC1A [Zea mays] | 0 |
| Q8LPN7 | E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6WJW8 | RING-type E3 ubiquitin transferase OS=Setaria viridis OX=4556 GN=SEVIR_1G339100v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology