Basic Information
Locus ID:
Zma_g14385
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
U-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr07 | 21248857 | 21250242 | - | Zma_g14385 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.93 | 49,217.38 Da | 42.73 | 100.37 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 52 | 93 | 7.57354E-21 | - |
| Pfam | PF04564 | U-box domain | 48 | 119 | 1.6E-19 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 38 | 120 | 4.24E-28 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 223 | 443 | 2.64E-18 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 231 | 452 | 1.8E-19 | IPR011989 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 38 | 124 | 2.6E-27 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 51 | 114 | 1.1E-26 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 47 | 121 | 29.351799 | IPR003613 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37490.1 | ARM repeat superfamily protein. | 0 |
| RefSeq | XP_039791383.1 | U-box domain-containing protein 21-like [Panicum virgatum] | 0 |
| Q5PNY6 | U-box domain-containing protein 21 OS=Arabidopsis thaliana OX=3702 GN=PUB21 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9UYX5 | RING-type E3 ubiquitin transferase (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_19965 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology