Basic Information
Locus ID:
Zma_g14378
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr07 | 21178155 | 21181463 | - | Zma_g14378 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 47,053.97 Da | 53.74 | 84.01 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 387 | 429 | 1.1E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 376 | 433 | 1.62E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 333 | 433 | 2.8E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 388 | 428 | 1.5E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 388 | 429 | 12.740079 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 111 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G68070.1 | Zinc finger, C3HC4 type (RING finger) family protein. | 0 |
| RefSeq | XP_039772930.1 | E3 ubiquitin protein ligase RIE1-like [Panicum virgatum] | 0 |
| Q8GUU2 | E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A835F5S2 | RING-type domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_017473 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology