Basic Information
Locus ID:
Zma_g14358
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr07 | 21067215 | 21067659 | + | Zma_g14358 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.80 | 12,253.83 Da | 47.77 | 72.73 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 54 | 96 | 2.01713E-25 | - |
| Pfam | PF04564 | U-box domain | 50 | 102 | 1.3E-14 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 50 | 107 | 3.93E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 30 | 108 | 3.1E-20 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 53 | 107 | 4.7E-18 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 49 | 110 | 25.663141 | IPR003613 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 44 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71020.2 | ARM repeat superfamily protein. | 0 |
| RefSeq | XP_039791337.1 | U-box domain-containing protein 11-like [Panicum virgatum] | 0 |
| Q9C9A6 | U-box domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=PUB10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0A9DC06 | RING-type E3 ubiquitin transferase OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology