Basic Information
Locus ID:
Zma_g13882
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
AT hook motif family protein, expressed
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr07 | 17695396 | 17702016 | - | Zma_g13882 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.75 | 84,018.24 Da | 51.02 | 61.16 | -0.99 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 528 | 568 | 0.00251673 | IPR002999 |
| SUPERFAMILY | SSF48371 | ARM repeat | 16 | 223 | 1.86E-6 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 525 | 568 | 1.5E-6 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 518 | 572 | 1.0E-10 | - |
| SMART | SM00384 | AT_hook_2 | 385 | 397 | 26.0 | IPR017956 |
| SMART | SM00384 | AT_hook_2 | 483 | 495 | 13.0 | IPR017956 |
| SMART | SM00384 | AT_hook_2 | 620 | 632 | 3.7 | IPR017956 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 731 | 751 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 416 | 473 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 647 | 724 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 523 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 489 | 519 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 579 | 598 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 599 | 625 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 579 | 770 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 631 | 645 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_025804884.1 | ABC transporter F family member 4-like isoform X2 [Panicum hallii] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S3GR96 | Tudor domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_1G304900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology