Basic Information
Locus ID:
Zma_g13786
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Glycerophosphoryl diester phosphodiesterase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr07 | 17169282 | 17173642 | + | Zma_g13786 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 81,045.46 Da | 34.80 | 87.93 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 354 | 655 | 6.12643E-156 | - |
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 41 | 337 | 4.54134E-171 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 359 | 651 | 4.0E-43 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 40 | 337 | 4.45E-32 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 353 | 655 | 4.71E-48 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 352 | 656 | 1.7E-51 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 40 | 337 | 5.1E-24 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 41 | 338 | 27.800852 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 354 | 656 | 38.105259 | IPR030395 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55480.1 | SHV3-like 1. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. | 0 |
| RefSeq | XP_039790225.1 | glycerophosphodiester phosphodiesterase GDPDL3-like [Panicum virgatum] | 0 |
| Q9FJ62 | Glycerophosphodiester phosphodiesterase GDPDL4 OS=Arabidopsis thaliana OX=3702 GN=GDPDL4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9V0R4 | glycerophosphodiester phosphodiesterase OS=Eragrostis curvula OX=38414 GN=EJB05_21061 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology