Basic Information
Locus ID:
Zma_g13718
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr07 | 16768695 | 16769903 | + | Zma_g13718 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.53 | 41,812.46 Da | 40.11 | 68.33 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 195 | 241 | 1.2E-8 | IPR006652 |
| Pfam | PF00646 | F-box domain | 49 | 84 | 5.7E-6 | IPR001810 |
| SUPERFAMILY | SSF117281 | Kelch motif | 114 | 388 | 4.97E-32 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 43 | 91 | 1.96E-8 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 91 | 400 | 3.9E-30 | IPR015915 |
| SMART | SM00256 | fbox_2 | 51 | 91 | 7.7E-6 | IPR001810 |
| SMART | SM00612 | kelc_smart | 207 | 254 | 0.12 | IPR006652 |
| SMART | SM00612 | kelc_smart | 158 | 206 | 0.033 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_025794959.1 | F-box/kelch-repeat protein SKIP20-like [Panicum hallii] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | K3Z0B2 | F-box domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology