Basic Information
Locus ID:
Zma_g13279
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr07 | 13173903 | 13174982 | + | Zma_g13279 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 40,048.30 Da | 56.44 | 83.09 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 22 | 149 | 2.32177E-23 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 187 | 294 | 5.3E-27 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 20 | 154 | 1.05E-28 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 166 | 295 | 1.55E-32 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 19 | 152 | 1.6E-23 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 294 | 358 | 9.0E-19 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 166 | 290 | 1.8E-35 | IPR011333 |
| SMART | SM00225 | BTB_4 | 188 | 295 | 1.7E-26 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 20 | 149 | 15.328181 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 188 | 256 | 17.603428 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_012704458.1 | BTB/POZ and MATH domain-containing protein 2 [Setaria italica] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | K4AI87 | BTB domain-containing protein OS=Setaria italica OX=4555 GN=101767872 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Zoysia japonica | 1 | nbis-gene-28033 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g13279 |