Basic Information
Locus ID:
Zma_g12836
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr07 | 5584520 | 5589086 | - | Zma_g12836 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.96 | 46,226.93 Da | 42.18 | 106.19 | 0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 23 | 416 | 3.22229E-44 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 11 | 381 | 7.7E-29 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 10 | 418 | 1.18E-39 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 5 | 424 | 6.3E-42 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 6 | 432 | 12.228214 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 68 | 85 | - | IPR005829 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 56 | 72 | 1.8E-7 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 305 | 326 | 1.8E-7 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 365 | 388 | 1.8E-7 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 330 | 350 | 1.8E-7 | IPR001958 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 215 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_025793849.1 | hippocampus abundant transcript 1 protein isoform X1 [Panicum hallii] | 0 |
| P02982 | Tetracycline resistance protein, class A OS=Escherichia coli OX=562 GN=tetA PE=3 SV=2 | 0 | |
| TrEMBL | A0A8T0MRF0 | MFS domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_9NG467200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology