Basic Information
Locus ID:
Zma_g12515
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr07 | 3020549 | 3021166 | - | Zma_g12515 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 21,109.30 Da | 66.76 | 86.29 | 0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 124 | 166 | 1.7E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 123 | 172 | 3.77E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 86 | 171 | 5.0E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 124 | 165 | 1.9E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 124 | 166 | 12.356501 | IPR001841 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 29 | 6.0 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 205 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66070.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_025796764.1 | RING-H2 finger protein ATL39-like [Panicum hallii] | 0 |
| Q9FKX5 | NEP1-interacting protein-like 1 OS=Arabidopsis thaliana OX=3702 GN=ATL27 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9VEI0 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_25073 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology