Basic Information
Locus ID:
Zma_g12428
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Galactose oxidase, central domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr07 | 2327364 | 2328467 | - | Zma_g12428 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 38,993.95 Da | 54.46 | 76.68 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 5 | 37 | 1.2E-4 | IPR001810 |
| Pfam | PF13415 | Galactose oxidase, central domain | 121 | 166 | 1.2E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 51 | 7.33E-6 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 79 | 348 | 2.48E-39 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 69 | 361 | 3.5E-35 | IPR015915 |
| SMART | SM00612 | kelc_smart | 171 | 218 | 2.2E-5 | IPR006652 |
| SMART | SM00612 | kelc_smart | 121 | 169 | 1.1E-5 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_039788725.1 | F-box/kelch-repeat protein At1g80440-like [Panicum virgatum] | 0 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2T7F3H9 | F-box domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_1G081400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology