Basic Information
Locus ID:
Zma_g12401
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Short Name:
EBF1
Description:
Leucine-rich repeat - CC (cysteine-containing) subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr07 | 2111700 | 2113778 | - | Zma_g12401 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.79 | 68,470.74 Da | 43.70 | 105.87 | 0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 220 | 243 | 1.0 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 273 | 294 | 0.6 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 378 | 400 | 0.66 | IPR001611 |
| SUPERFAMILY | SSF81383 | F-box domain | 59 | 99 | 4.32E-6 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 345 | 607 | 1.43E-38 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 180 | 418 | 1.49E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 454 | 510 | 2.4E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 246 | 453 | 1.3E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 511 | 642 | 9.2E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 139 | 245 | 1.1E-14 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 511 | 536 | 1.8 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 352 | 377 | 19.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 272 | 297 | 2.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 165 | 193 | 470.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 590 | 615 | 39.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 220 | 245 | 1.6E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 404 | 429 | 280.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 194 | 219 | 6.3 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 538 | 563 | 0.0013 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 378 | 403 | 0.0014 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 458 | 483 | 45.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 246 | 271 | 0.025 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 564 | 588 | 0.8 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 484 | 509 | 0.023 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_004951542.1 | EIN3-binding F-box protein 1 [Setaria italica] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VDN1 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_24727 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology